Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.33■□□□□ 0.04
SSR3Q9UNL2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 HLA-A-202ENST00000376806 1854 ntBASIC15.32■□□□□ 0.04
SSR3Q9UNL2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 ESRRAP1-201ENST00000400596 1257 ntBASIC15.32■□□□□ 0.04
SSR3Q9UNL2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 BX088651.1-201ENST00000540551 451 ntBASIC15.32■□□□□ 0.04
SSR3Q9UNL2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 MIR600HG-201ENST00000449175 5984 ntBASIC15.32■□□□□ 0.04
SSR3Q9UNL2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR3Q9UNL2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 AP002490.2-201ENST00000524791 560 ntBASIC15.31■□□□□ 0.04
SSR3Q9UNL2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 AC104771.1-201ENST00000603335 964 ntBASIC15.31■□□□□ 0.04
SSR3Q9UNL2 AC024243.1-201ENST00000609234 778 ntBASIC15.31■□□□□ 0.04
SSR3Q9UNL2 AC073648.6-201ENST00000641589 218 ntBASIC15.31■□□□□ 0.04
SSR3Q9UNL2 AC092865.7-201ENST00000641832 219 ntBASIC15.31■□□□□ 0.04
SSR3Q9UNL2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR3Q9UNL2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.3■□□□□ 0.04
SSR3Q9UNL2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR3Q9UNL2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SSR3Q9UNL2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR3Q9UNL2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR3Q9UNL2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms