Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 PMS2P4-201ENST00000412466 1052 ntBASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 EGFEM1P-202ENST00000431685 1563 ntBASIC18.72■□□□□ 0.59
GTF2IRD1Q9UHL9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 AL133373.2-201ENST00000623187 2828 ntBASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 UXT-AS1-201ENST00000590504 1525 ntBASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 AC026150.2-201ENST00000564693 1156 ntBASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 WASH6P-202ENST00000359512 1437 ntBASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GTF2IRD1Q9UHL9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 TOP3BP1-201ENST00000420768 1380 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 SLC22A20-204ENST00000530038 1673 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 RNU1-129P-201ENST00000384064 167 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 MIR943-201ENST00000401286 94 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 AC107890.1-201ENST00000422478 521 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 SPDYE14P-201ENST00000442619 822 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 INGX-202ENST00000489074 768 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 AC091167.2-201ENST00000579581 588 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 U1.21-201ENST00000580816 167 ntBASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GTF2IRD1Q9UHL9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms