Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 PMPCAP1-201ENST00000508114 1576 ntBASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 IGHV3-47-201ENST00000425060 335 ntBASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRTM1Q9HBL6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 SIGLEC30P-201ENST00000455569 941 ntBASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 AC114341.1-201ENST00000618070 349 ntBASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRTM1Q9HBL6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 AL603756.1-201ENST00000606511 2163 ntBASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms