Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 AC106730.1-201ENST00000566722 1090 ntBASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 MRPL20P1-201ENST00000400819 433 ntBASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP13A3Q9H7F0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 PAWRP1-201ENST00000451083 565 ntBASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 AC034105.1-201ENST00000563488 319 ntBASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 MIR4751-201ENST00000578027 74 ntBASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP13A3Q9H7F0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 PRSS29P-201ENST00000440800 595 ntBASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP13A3Q9H7F0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms