Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 RNF216P1-203ENST00000404404 2427 ntBASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AC079328.2-201ENST00000561241 3354 ntBASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AL121956.5-201ENST00000625261 221 ntBASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.87■□□□□ 0.13
POLR2J3Q9H1A7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 CHCHD2P8-201ENST00000429873 447 ntBASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 AL121672.3-201ENST00000608644 468 ntBASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 AD001527.2-201ENST00000622994 785 ntBASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 AC078925.2-201ENST00000624013 1973 ntBASIC15.86■□□□□ 0.13
POLR2J3Q9H1A7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 AC092068.3-201ENST00000587894 2016 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms