Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS2Q99743 AP005901.3-202ENST00000581653 237 ntBASIC16.82■□□□□ 0.28
NPAS2Q99743 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS2Q99743 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS2Q99743 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS2Q99743 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS2Q99743 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS2Q99743 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NPAS2Q99743 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS2Q99743 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NPAS2Q99743 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS2Q99743 AC078925.2-201ENST00000624013 1973 ntBASIC16.81■□□□□ 0.28
NPAS2Q99743 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 NUS1P1-201ENST00000446295 882 ntBASIC16.81■□□□□ 0.28
NPAS2Q99743 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS2Q99743 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS2Q99743 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NPAS2Q99743 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS2Q99743 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS2Q99743 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS2Q99743 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS2Q99743 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS2Q99743 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS2Q99743 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS2Q99743 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
NPAS2Q99743 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NPAS2Q99743 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS2Q99743 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
NPAS2Q99743 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS2Q99743 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
NPAS2Q99743 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS2Q99743 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS2Q99743 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.8■□□□□ 0.28
NPAS2Q99743 GUSBP12-201ENST00000513727 720 ntBASIC16.8■□□□□ 0.28
NPAS2Q99743 AC012615.1-201ENST00000565797 1299 ntBASIC16.8■□□□□ 0.28
NPAS2Q99743 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS2Q99743 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.8■□□□□ 0.28
NPAS2Q99743 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.8■□□□□ 0.28
NPAS2Q99743 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS2Q99743 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS2Q99743 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS2Q99743 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS2Q99743 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS2Q99743 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS2Q99743 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS2Q99743 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS2Q99743 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms