Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.31■□□□□ 0.36
PHOX2BQ99453 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PHOX2BQ99453 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHOX2BQ99453 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 SIRPAP1-201ENST00000448467 1770 ntBASIC17.3■□□□□ 0.36
PHOX2BQ99453 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 BCYRN1-201ENST00000418539 200 ntBASIC17.3■□□□□ 0.36
PHOX2BQ99453 AC241585.1-201ENST00000433527 519 ntBASIC17.3■□□□□ 0.36
PHOX2BQ99453 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 AL513480.1-201ENST00000451731 511 ntBASIC17.3■□□□□ 0.36
PHOX2BQ99453 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 TP53TG3HP-202ENST00000569755 579 ntBASIC17.3■□□□□ 0.36
PHOX2BQ99453 MIR4538-201ENST00000581377 78 ntBASIC17.3■□□□□ 0.36
PHOX2BQ99453 MIR4259-201ENST00000584466 101 ntBASIC17.3■□□□□ 0.36
PHOX2BQ99453 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 AL162274.1-201ENST00000617191 1098 ntBASIC17.3■□□□□ 0.36
PHOX2BQ99453 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHOX2BQ99453 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
PHOX2BQ99453 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 AC022210.1-201ENST00000449856 793 ntBASIC17.29■□□□□ 0.36
PHOX2BQ99453 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 AC132938.2-201ENST00000579188 680 ntBASIC17.29■□□□□ 0.36
PHOX2BQ99453 AL591163.1-201ENST00000641757 987 ntBASIC17.29■□□□□ 0.36
PHOX2BQ99453 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 WIZP1-201ENST00000531444 2299 ntBASIC17.29■□□□□ 0.36
PHOX2BQ99453 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 GNAS-203ENST00000306120 1878 ntBASIC17.29■□□□□ 0.36
PHOX2BQ99453 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHOX2BQ99453 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
PHOX2BQ99453 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AC106820.2-201ENST00000563775 3264 ntBASIC17.28■□□□□ 0.36
PHOX2BQ99453 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AL499627.1-201ENST00000569373 2188 ntBASIC17.28■□□□□ 0.36
PHOX2BQ99453 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms