Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 FAM86C2P-203ENST00000528684 1004 ntBASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 AC011467.4-201ENST00000594891 528 ntBASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 AJ011932.1-201ENST00000621707 465 ntBASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 AC069262.1-201ENST00000539058 672 ntBASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 AC092580.3-201ENST00000430932 139 ntBASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 AC093214.1-201ENST00000511688 1107 ntBASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP2Q96SN8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 AC027307.2-201ENST00000591252 911 ntBASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP2Q96SN8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 AC105233.2-201ENST00000523697 349 ntBASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 AF228730.5-201ENST00000530288 346 ntBASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 UXT-AS1-201ENST00000590504 1525 ntBASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 AC015911.4-201ENST00000588022 1070 ntBASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP2Q96SN8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms