Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 PMPCAP1-201ENST00000508114 1576 ntBASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 KLF4P1-201ENST00000412782 1185 ntBASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 AC073592.5-201ENST00000624854 528 ntBASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 LINC02012-201ENST00000608206 1725 ntBASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF439Q8NDP4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms