Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHPFQ8IZ52 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 FAM185BP-201ENST00000443595 716 ntBASIC17.43■□□□□ 0.38
CHPFQ8IZ52 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 AL513480.1-201ENST00000451731 511 ntBASIC17.43■□□□□ 0.38
CHPFQ8IZ52 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHPFQ8IZ52 LINC00896-202ENST00000609602 2128 ntBASIC17.42■□□□□ 0.38
CHPFQ8IZ52 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 AC068137.2-201ENST00000605408 478 ntBASIC17.42■□□□□ 0.38
CHPFQ8IZ52 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.42■□□□□ 0.38
CHPFQ8IZ52 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 AC012317.2-201ENST00000623305 2251 ntBASIC17.41■□□□□ 0.38
CHPFQ8IZ52 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 PAWRP1-201ENST00000451083 565 ntBASIC17.41■□□□□ 0.38
CHPFQ8IZ52 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 AP002472.1-201ENST00000577490 586 ntBASIC17.41■□□□□ 0.38
CHPFQ8IZ52 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.41■□□□□ 0.38
CHPFQ8IZ52 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms