Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
UBXN1Q04323 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
UBXN1Q04323 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UBXN1Q04323 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 BX276092.5-203ENST00000456199 560 ntBASIC18.79■□□□□ 0.6
UBXN1Q04323 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBXN1Q04323 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 AC011467.2-201ENST00000598425 242 ntBASIC18.79■□□□□ 0.6
UBXN1Q04323 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.79■□□□□ 0.6
UBXN1Q04323 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.79■□□□□ 0.6
UBXN1Q04323 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.79■□□□□ 0.6
UBXN1Q04323 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 PCDHB17P-201ENST00000539533 2393 ntBASIC18.79■□□□□ 0.6
UBXN1Q04323 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.79■□□□□ 0.6
UBXN1Q04323 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
UBXN1Q04323 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBXN1Q04323 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.78■□□□□ 0.6
UBXN1Q04323 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.78■□□□□ 0.6
UBXN1Q04323 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.78■□□□□ 0.6
UBXN1Q04323 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
UBXN1Q04323 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.78■□□□□ 0.6
UBXN1Q04323 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.78■□□□□ 0.6
UBXN1Q04323 CHCHD2P8-201ENST00000429873 447 ntBASIC18.78■□□□□ 0.6
UBXN1Q04323 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.78■□□□□ 0.6
UBXN1Q04323 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.78■□□□□ 0.6
UBXN1Q04323 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
UBXN1Q04323 NTF6B-201ENST00000591913 560 ntBASIC18.78■□□□□ 0.6
UBXN1Q04323 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.78■□□□□ 0.6
UBXN1Q04323 AC073592.5-201ENST00000624854 528 ntBASIC18.78■□□□□ 0.6
UBXN1Q04323 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.78■□□□□ 0.6
UBXN1Q04323 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.78■□□□□ 0.6
UBXN1Q04323 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.78■□□□□ 0.6
UBXN1Q04323 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBXN1Q04323 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.78■□□□□ 0.6
UBXN1Q04323 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBXN1Q04323 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.77■□□□□ 0.6
UBXN1Q04323 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
UBXN1Q04323 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.77■□□□□ 0.6
UBXN1Q04323 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
UBXN1Q04323 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.77■□□□□ 0.6
UBXN1Q04323 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.77■□□□□ 0.6
UBXN1Q04323 TMPOP1-202ENST00000424642 1267 ntBASIC18.77■□□□□ 0.6
UBXN1Q04323 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.77■□□□□ 0.6
UBXN1Q04323 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.77■□□□□ 0.6
UBXN1Q04323 AL121672.3-201ENST00000608644 468 ntBASIC18.77■□□□□ 0.6
UBXN1Q04323 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
UBXN1Q04323 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
UBXN1Q04323 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.77■□□□□ 0.6
UBXN1Q04323 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBXN1Q04323 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.77■□□□□ 0.6
UBXN1Q04323 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms