Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2BQ00403 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2BQ00403 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.65■□□□□ 0.58
GTF2BQ00403 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2BQ00403 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2BQ00403 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GTF2BQ00403 PCDHB17P-201ENST00000539533 2393 ntBASIC18.64■□□□□ 0.58
GTF2BQ00403 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GTF2BQ00403 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
GTF2BQ00403 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2BQ00403 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GTF2BQ00403 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2BQ00403 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2BQ00403 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2BQ00403 AC105020.1-201ENST00000435356 2205 ntBASIC18.64■□□□□ 0.57
GTF2BQ00403 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GTF2BQ00403 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2BQ00403 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2BQ00403 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
GTF2BQ00403 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
GTF2BQ00403 CRYGEP-201ENST00000412192 528 ntBASIC18.64■□□□□ 0.57
GTF2BQ00403 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.64■□□□□ 0.57
GTF2BQ00403 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
GTF2BQ00403 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2BQ00403 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.64■□□□□ 0.57
GTF2BQ00403 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.64■□□□□ 0.57
GTF2BQ00403 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.64■□□□□ 0.57
GTF2BQ00403 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2BQ00403 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GTF2BQ00403 ZNF259P1-201ENST00000407656 1365 ntBASIC18.64■□□□□ 0.57
GTF2BQ00403 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GTF2BQ00403 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2BQ00403 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2BQ00403 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
GTF2BQ00403 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2BQ00403 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2BQ00403 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
GTF2BQ00403 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.64■□□□□ 0.57
GTF2BQ00403 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2BQ00403 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GTF2BQ00403 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.63■□□□□ 0.57
GTF2BQ00403 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GTF2BQ00403 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 IGLL3P-201ENST00000412472 434 ntBASIC18.63■□□□□ 0.57
GTF2BQ00403 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.63■□□□□ 0.57
GTF2BQ00403 FAM185BP-201ENST00000443595 716 ntBASIC18.63■□□□□ 0.57
GTF2BQ00403 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.63■□□□□ 0.57
GTF2BQ00403 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.63■□□□□ 0.57
GTF2BQ00403 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2BQ00403 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2BQ00403 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2BQ00403 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2BQ00403 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2BQ00403 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2BQ00403 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2BQ00403 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2BQ00403 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.62■□□□□ 0.57
GTF2BQ00403 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2BQ00403 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.62■□□□□ 0.57
GTF2BQ00403 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2BQ00403 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2BQ00403 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2BQ00403 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.62■□□□□ 0.57
GTF2BQ00403 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2BQ00403 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.62■□□□□ 0.57
GTF2BQ00403 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GTF2BQ00403 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GTF2BQ00403 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.62■□□□□ 0.57
GTF2BQ00403 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms