Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.52□□□□□ -0.24
CCL20P78556 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL20P78556 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL20P78556 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 KRT18P29-201ENST00000397031 1267 ntBASIC13.52□□□□□ -0.25
CCL20P78556 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 MFAP1P1-201ENST00000442257 1255 ntBASIC13.52□□□□□ -0.25
CCL20P78556 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 UNC93B5-201ENST00000530315 699 ntBASIC13.52□□□□□ -0.25
CCL20P78556 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.52□□□□□ -0.25
CCL20P78556 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL20P78556 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL20P78556 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.52□□□□□ -0.25
CCL20P78556 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CCL20P78556 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL20P78556 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL20P78556 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCL20P78556 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL20P78556 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL20P78556 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL20P78556 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCL20P78556 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL20P78556 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 AL009178.2-201ENST00000597278 2719 ntBASIC13.52□□□□□ -0.25
CCL20P78556 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL20P78556 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL20P78556 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CCL20P78556 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CCL20P78556 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL20P78556 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCL20P78556 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL20P78556 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 AC006058.4-201ENST00000624016 1670 ntBASIC13.51□□□□□ -0.25
CCL20P78556 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL20P78556 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL20P78556 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL20P78556 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL20P78556 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 CA15P1-201ENST00000481698 905 ntBASIC13.51□□□□□ -0.25
CCL20P78556 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL20P78556 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL20P78556 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL20P78556 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.51□□□□□ -0.25
CCL20P78556 AC022517.1-201ENST00000592429 346 ntBASIC13.51□□□□□ -0.25
CCL20P78556 AC008687.5-201ENST00000593746 558 ntBASIC13.51□□□□□ -0.25
CCL20P78556 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CCL20P78556 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CCL20P78556 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL20P78556 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL20P78556 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CCL20P78556 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL20P78556 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCL20P78556 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCL20P78556 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms