Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GABREP78334 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GABREP78334 AC135776.1-201ENST00000319817 2481 ntBASIC16.26■□□□□ 0.19
GABREP78334 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
GABREP78334 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GABREP78334 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GABREP78334 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
GABREP78334 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GABREP78334 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GABREP78334 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.25■□□□□ 0.19
GABREP78334 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.25■□□□□ 0.19
GABREP78334 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.25■□□□□ 0.19
GABREP78334 RBPMS2P1-201ENST00000437762 623 ntBASIC16.25■□□□□ 0.19
GABREP78334 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.25■□□□□ 0.19
GABREP78334 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.25■□□□□ 0.19
GABREP78334 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 IGHV3-42-201ENST00000520410 361 ntBASIC16.25■□□□□ 0.19
GABREP78334 AC243562.1-201ENST00000560672 389 ntBASIC16.25■□□□□ 0.19
GABREP78334 RN7SL204P-201ENST00000582831 262 ntBASIC16.25■□□□□ 0.19
GABREP78334 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.25■□□□□ 0.19
GABREP78334 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.25■□□□□ 0.19
GABREP78334 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GABREP78334 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
GABREP78334 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
GABREP78334 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GABREP78334 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GABREP78334 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.25■□□□□ 0.19
GABREP78334 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.25■□□□□ 0.19
GABREP78334 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABREP78334 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
GABREP78334 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.24■□□□□ 0.19
GABREP78334 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.24■□□□□ 0.19
GABREP78334 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
GABREP78334 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
GABREP78334 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.24■□□□□ 0.19
GABREP78334 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.24■□□□□ 0.19
GABREP78334 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GABREP78334 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.24■□□□□ 0.19
GABREP78334 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.24■□□□□ 0.19
GABREP78334 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GABREP78334 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.24■□□□□ 0.19
GABREP78334 IGHV3-62-201ENST00000520057 340 ntBASIC16.24■□□□□ 0.19
GABREP78334 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.24■□□□□ 0.19
GABREP78334 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
GABREP78334 AC005225.4-201ENST00000557330 545 ntBASIC16.24■□□□□ 0.19
GABREP78334 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.24■□□□□ 0.19
GABREP78334 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.24■□□□□ 0.19
GABREP78334 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.24■□□□□ 0.19
GABREP78334 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.24■□□□□ 0.19
GABREP78334 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
GABREP78334 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.24■□□□□ 0.19
GABREP78334 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GABREP78334 REXO1L9P-201ENST00000604264 2108 ntBASIC16.24■□□□□ 0.19
GABREP78334 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 AKAP8P1-201ENST00000434743 1349 ntBASIC16.23■□□□□ 0.19
GABREP78334 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.23■□□□□ 0.19
GABREP78334 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.23■□□□□ 0.19
GABREP78334 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GABREP78334 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.23■□□□□ 0.19
GABREP78334 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
GABREP78334 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.23■□□□□ 0.19
GABREP78334 DUX4L17-201ENST00000557360 1267 ntBASIC16.23■□□□□ 0.19
GABREP78334 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms