Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN2P57739 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN2P57739 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN2P57739 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN2P57739 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CLDN2P57739 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN2P57739 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN2P57739 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN2P57739 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN2P57739 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN2P57739 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN2P57739 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN2P57739 REXO1L3P-201ENST00000622202 1288 ntBASIC16.85■□□□□ 0.29
CLDN2P57739 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN2P57739 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLDN2P57739 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN2P57739 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CLDN2P57739 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN2P57739 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN2P57739 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN2P57739 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN2P57739 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN2P57739 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN2P57739 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN2P57739 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN2P57739 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN2P57739 AC004461.1-201ENST00000412461 403 ntBASIC16.84■□□□□ 0.29
CLDN2P57739 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.84■□□□□ 0.29
CLDN2P57739 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN2P57739 AC112191.1-201ENST00000523689 701 ntBASIC16.84■□□□□ 0.29
CLDN2P57739 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
CLDN2P57739 AC105339.1-204ENST00000636249 355 ntBASIC16.84■□□□□ 0.29
CLDN2P57739 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
CLDN2P57739 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN2P57739 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN2P57739 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN2P57739 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN2P57739 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN2P57739 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN2P57739 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN2P57739 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN2P57739 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN2P57739 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN2P57739 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CLDN2P57739 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN2P57739 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CLDN2P57739 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN2P57739 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLDN2P57739 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN2P57739 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN2P57739 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN2P57739 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN2P57739 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN2P57739 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN2P57739 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN2P57739 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN2P57739 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CLDN2P57739 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms