Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT6CP48668 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6CP48668 BNIP3P18-201ENST00000593976 575 ntBASIC16.66■□□□□ 0.26
KRT6CP48668 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT6CP48668 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT6CP48668 AL162727.3-201ENST00000635661 2787 ntBASIC16.66■□□□□ 0.26
KRT6CP48668 AP000550.4-202ENST00000639755 178 ntBASIC16.66■□□□□ 0.26
KRT6CP48668 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6CP48668 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6CP48668 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6CP48668 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6CP48668 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6CP48668 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6CP48668 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6CP48668 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6CP48668 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6CP48668 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6CP48668 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6CP48668 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT6CP48668 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT6CP48668 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KRT6CP48668 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT6CP48668 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KRT6CP48668 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT6CP48668 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT6CP48668 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT6CP48668 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.65■□□□□ 0.26
KRT6CP48668 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT6CP48668 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT6CP48668 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.65■□□□□ 0.26
KRT6CP48668 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KRT6CP48668 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
KRT6CP48668 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6CP48668 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KRT6CP48668 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KRT6CP48668 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
KRT6CP48668 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT6CP48668 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 RCN1P2-201ENST00000398357 915 ntBASIC16.64■□□□□ 0.25
KRT6CP48668 POM121L3P-201ENST00000419331 1163 ntBASIC16.64■□□□□ 0.25
KRT6CP48668 IGHV3-47-201ENST00000425060 335 ntBASIC16.64■□□□□ 0.25
KRT6CP48668 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT6CP48668 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT6CP48668 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 AC104819.1-201ENST00000504587 486 ntBASIC16.64■□□□□ 0.25
KRT6CP48668 AC074051.2-201ENST00000565115 352 ntBASIC16.64■□□□□ 0.25
KRT6CP48668 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT6CP48668 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT6CP48668 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT6CP48668 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 AC114341.1-201ENST00000618070 349 ntBASIC16.64■□□□□ 0.25
KRT6CP48668 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KRT6CP48668 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
KRT6CP48668 GPR89P-201ENST00000407924 1495 ntBASIC16.64■□□□□ 0.25
KRT6CP48668 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KRT6CP48668 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
KRT6CP48668 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
KRT6CP48668 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6CP48668 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT6CP48668 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
KRT6CP48668 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms