Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A3P43003 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A3P43003 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A3P43003 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A3P43003 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A3P43003 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.79■□□□□ 0.12
SLC1A3P43003 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 AL020989.1-201ENST00000422979 469 ntBASIC15.79■□□□□ 0.12
SLC1A3P43003 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC1A3P43003 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC1A3P43003 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A3P43003 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC1A3P43003 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.79■□□□□ 0.12
SLC1A3P43003 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC1A3P43003 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC1A3P43003 FLJ38576-201ENST00000623820 2459 ntBASIC15.79■□□□□ 0.12
SLC1A3P43003 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC1A3P43003 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC1A3P43003 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC1A3P43003 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC1A3P43003 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC1A3P43003 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC1A3P43003 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 SPDYE21P-201ENST00000413323 827 ntBASIC15.78■□□□□ 0.12
SLC1A3P43003 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC1A3P43003 SIGLEC30P-201ENST00000455569 941 ntBASIC15.78■□□□□ 0.12
SLC1A3P43003 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.78■□□□□ 0.12
SLC1A3P43003 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC1A3P43003 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.78■□□□□ 0.12
SLC1A3P43003 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.78■□□□□ 0.12
SLC1A3P43003 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC1A3P43003 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SLC1A3P43003 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SLC1A3P43003 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC1A3P43003 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SLC1A3P43003 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A3P43003 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC1A3P43003 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SLC1A3P43003 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SLC1A3P43003 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A3P43003 PCDH8P1-201ENST00000428983 2773 ntBASIC15.77■□□□□ 0.12
SLC1A3P43003 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 LINC02012-201ENST00000608206 1725 ntBASIC15.77■□□□□ 0.12
SLC1A3P43003 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A3P43003 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A3P43003 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC1A3P43003 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC1A3P43003 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A3P43003 SLC25A1P3-201ENST00000395415 828 ntBASIC15.77■□□□□ 0.12
SLC1A3P43003 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SLC1A3P43003 AC132008.2-207ENST00000454517 770 ntBASIC15.77■□□□□ 0.12
SLC1A3P43003 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms