Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 AC092171.3-201ENST00000610122 2651 ntBASIC17.27■□□□□ 0.36
CCNFP41002 NSUN5P1-202ENST00000421140 1535 ntBASIC17.27■□□□□ 0.36
CCNFP41002 NSUN5P2-203ENST00000457352 1529 ntBASIC17.27■□□□□ 0.36
CCNFP41002 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNFP41002 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCNFP41002 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CCNFP41002 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNFP41002 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNFP41002 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CCNFP41002 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 FAM220CP-201ENST00000395253 831 ntBASIC17.27■□□□□ 0.36
CCNFP41002 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.27■□□□□ 0.36
CCNFP41002 IGHV3-47-201ENST00000425060 335 ntBASIC17.27■□□□□ 0.36
CCNFP41002 AC007967.3-201ENST00000434308 558 ntBASIC17.27■□□□□ 0.36
CCNFP41002 HCG4P8-203ENST00000443049 980 ntBASIC17.27■□□□□ 0.36
CCNFP41002 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 AC091607.1-201ENST00000490318 1060 ntBASIC17.27■□□□□ 0.36
CCNFP41002 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNFP41002 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.27■□□□□ 0.36
CCNFP41002 AC109462.3-201ENST00000573934 613 ntBASIC17.27■□□□□ 0.36
CCNFP41002 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNFP41002 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.27■□□□□ 0.36
CCNFP41002 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.27■□□□□ 0.36
CCNFP41002 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNFP41002 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCNFP41002 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCNFP41002 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CCNFP41002 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.27■□□□□ 0.35
CCNFP41002 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCNFP41002 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCNFP41002 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCNFP41002 AC026691.1-201ENST00000602502 2017 ntBASIC17.26■□□□□ 0.35
CCNFP41002 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 AC092850.2-201ENST00000623821 2697 ntBASIC17.26■□□□□ 0.35
CCNFP41002 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
CCNFP41002 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.26■□□□□ 0.35
CCNFP41002 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 AC006449.5-201ENST00000610658 2098 ntBASIC17.26■□□□□ 0.35
CCNFP41002 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
CCNFP41002 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.26■□□□□ 0.35
CCNFP41002 POM121L3P-201ENST00000419331 1163 ntBASIC17.26■□□□□ 0.35
CCNFP41002 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 AC122714.2-201ENST00000502787 707 ntBASIC17.26■□□□□ 0.35
CCNFP41002 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.26■□□□□ 0.35
CCNFP41002 IGHV3-52-201ENST00000519770 353 ntBASIC17.26■□□□□ 0.35
CCNFP41002 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CCNFP41002 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCNFP41002 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
CCNFP41002 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.26■□□□□ 0.35
CCNFP41002 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CCNFP41002 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CCNFP41002 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.26■□□□□ 0.35
CCNFP41002 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.26■□□□□ 0.35
CCNFP41002 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.26■□□□□ 0.35
CCNFP41002 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
CCNFP41002 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.26■□□□□ 0.35
CCNFP41002 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNFP41002 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCNFP41002 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCNFP41002 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNFP41002 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNFP41002 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCNFP41002 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCNFP41002 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.25■□□□□ 0.35
CCNFP41002 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNFP41002 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCNFP41002 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.25■□□□□ 0.35
CCNFP41002 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.25■□□□□ 0.35
CCNFP41002 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.25■□□□□ 0.35
CCNFP41002 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNFP41002 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms