Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 AC106886.4-201ENST00000623557 2502 ntBASIC17.37■□□□□ 0.37
HADHAP40939 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.37■□□□□ 0.37
HADHAP40939 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.37■□□□□ 0.37
HADHAP40939 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
HADHAP40939 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.36■□□□□ 0.37
HADHAP40939 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.36■□□□□ 0.37
HADHAP40939 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 SLC25A1P3-201ENST00000395415 828 ntBASIC17.36■□□□□ 0.37
HADHAP40939 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.36■□□□□ 0.37
HADHAP40939 TPM4P1-201ENST00000436100 807 ntBASIC17.36■□□□□ 0.37
HADHAP40939 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.36■□□□□ 0.37
HADHAP40939 AC124947.2-201ENST00000547118 1133 ntBASIC17.36■□□□□ 0.37
HADHAP40939 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 AP001269.4-201ENST00000609611 512 ntBASIC17.36■□□□□ 0.37
HADHAP40939 AL732292.2-201ENST00000609649 430 ntBASIC17.36■□□□□ 0.37
HADHAP40939 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.36■□□□□ 0.37
HADHAP40939 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HADHAP40939 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HADHAP40939 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.36■□□□□ 0.37
HADHAP40939 AL135999.2-201ENST00000622438 1686 ntBASIC17.36■□□□□ 0.37
HADHAP40939 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HADHAP40939 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.35■□□□□ 0.37
HADHAP40939 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.35■□□□□ 0.37
HADHAP40939 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.35■□□□□ 0.37
HADHAP40939 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.35■□□□□ 0.37
HADHAP40939 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.35■□□□□ 0.37
HADHAP40939 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.35■□□□□ 0.37
HADHAP40939 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HADHAP40939 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.35■□□□□ 0.37
HADHAP40939 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HADHAP40939 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.35■□□□□ 0.37
HADHAP40939 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
HADHAP40939 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.34■□□□□ 0.37
HADHAP40939 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.34■□□□□ 0.37
HADHAP40939 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
HADHAP40939 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.34■□□□□ 0.37
HADHAP40939 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.34■□□□□ 0.37
HADHAP40939 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.34■□□□□ 0.37
HADHAP40939 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.34■□□□□ 0.37
HADHAP40939 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HADHAP40939 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms