Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GDNFP39905 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GDNFP39905 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.98□□□□□ -0.01
GDNFP39905 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.98□□□□□ -0.01
GDNFP39905 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GDNFP39905 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.98□□□□□ -0.01
GDNFP39905 TSPY5P-201ENST00000426936 936 ntBASIC14.98□□□□□ -0.01
GDNFP39905 PVRIG2P-201ENST00000435460 978 ntBASIC14.98□□□□□ -0.01
GDNFP39905 AL359075.1-203ENST00000462729 1002 ntBASIC14.98□□□□□ -0.01
GDNFP39905 AC092597.1-201ENST00000487352 616 ntBASIC14.98□□□□□ -0.01
GDNFP39905 AC034232.1-201ENST00000506026 1064 ntBASIC14.98□□□□□ -0.01
GDNFP39905 KRT18P21-201ENST00000515767 1272 ntBASIC14.98□□□□□ -0.01
GDNFP39905 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.98□□□□□ -0.01
GDNFP39905 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.98□□□□□ -0.01
GDNFP39905 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.98□□□□□ -0.01
GDNFP39905 AL031432.5-201ENST00000641059 760 ntBASIC14.98□□□□□ -0.01
GDNFP39905 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GDNFP39905 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.98□□□□□ -0.01
GDNFP39905 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.98□□□□□ -0.01
GDNFP39905 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
GDNFP39905 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.98□□□□□ -0.01
GDNFP39905 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
GDNFP39905 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.98□□□□□ -0.01
GDNFP39905 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.98□□□□□ -0.01
GDNFP39905 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GDNFP39905 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.97□□□□□ -0.01
GDNFP39905 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.97□□□□□ -0.01
GDNFP39905 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.97□□□□□ -0.01
GDNFP39905 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
GDNFP39905 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GDNFP39905 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 RNF152P1-201ENST00000397754 604 ntBASIC14.97□□□□□ -0.01
GDNFP39905 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
GDNFP39905 AC008687.5-201ENST00000593746 558 ntBASIC14.97□□□□□ -0.01
GDNFP39905 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.97□□□□□ -0.01
GDNFP39905 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.97□□□□□ -0.01
GDNFP39905 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.97□□□□□ -0.01
GDNFP39905 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
GDNFP39905 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.97□□□□□ -0.01
GDNFP39905 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GDNFP39905 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
GDNFP39905 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GDNFP39905 AL391807.1-203ENST00000604392 2365 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms