Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 KRT18P22-201ENST00000402024 1347 ntBASIC14.16□□□□□ -0.14
SNCAP37840 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.16□□□□□ -0.14
SNCAP37840 ECEL1P3-201ENST00000427961 737 ntBASIC14.16□□□□□ -0.14
SNCAP37840 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.16□□□□□ -0.14
SNCAP37840 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 AC140113.3-201ENST00000605663 199 ntBASIC14.16□□□□□ -0.14
SNCAP37840 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 LINC01568-207ENST00000641790 1380 ntBASIC14.16□□□□□ -0.14
SNCAP37840 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SNCAP37840 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNCAP37840 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.15□□□□□ -0.14
SNCAP37840 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.15□□□□□ -0.14
SNCAP37840 KRT8P9-201ENST00000558927 1449 ntBASIC14.15□□□□□ -0.14
SNCAP37840 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNCAP37840 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.15□□□□□ -0.14
SNCAP37840 KRT89P-201ENST00000620027 1478 ntBASIC14.15□□□□□ -0.14
SNCAP37840 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.15□□□□□ -0.14
SNCAP37840 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SNCAP37840 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.15□□□□□ -0.14
SNCAP37840 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SNCAP37840 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.15□□□□□ -0.14
SNCAP37840 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNCAP37840 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.15□□□□□ -0.14
SNCAP37840 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNCAP37840 AC024909.3-201ENST00000611513 2257 ntBASIC14.15□□□□□ -0.14
SNCAP37840 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.14□□□□□ -0.15
SNCAP37840 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNCAP37840 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.14□□□□□ -0.15
SNCAP37840 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.14□□□□□ -0.15
SNCAP37840 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.14□□□□□ -0.15
SNCAP37840 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms