Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.24■□□□□ 0.03
HOXC12P31275 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HOXC12P31275 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.24■□□□□ 0.03
HOXC12P31275 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HOXC12P31275 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.24■□□□□ 0.03
HOXC12P31275 PRYP5-201ENST00000451909 266 ntBASIC15.24■□□□□ 0.03
HOXC12P31275 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.24■□□□□ 0.03
HOXC12P31275 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.24■□□□□ 0.03
HOXC12P31275 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.24■□□□□ 0.03
HOXC12P31275 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.24■□□□□ 0.03
HOXC12P31275 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.24■□□□□ 0.03
HOXC12P31275 AL589182.2-201ENST00000619332 1049 ntBASIC15.24■□□□□ 0.03
HOXC12P31275 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.24■□□□□ 0.03
HOXC12P31275 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HOXC12P31275 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
HOXC12P31275 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.24■□□□□ 0.03
HOXC12P31275 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXC12P31275 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 AC134043.2-201ENST00000624206 2238 ntBASIC15.23■□□□□ 0.03
HOXC12P31275 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HOXC12P31275 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HOXC12P31275 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXC12P31275 DNAJB3-202ENST00000449667 1266 ntBASIC15.23■□□□□ 0.03
HOXC12P31275 RNA5SP416-201ENST00000516838 111 ntBASIC15.23■□□□□ 0.03
HOXC12P31275 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXC12P31275 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXC12P31275 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXC12P31275 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.23■□□□□ 0.03
HOXC12P31275 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 AC025062.2-201ENST00000605477 670 ntBASIC15.23■□□□□ 0.03
HOXC12P31275 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXC12P31275 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 AC008735.5-201ENST00000623544 497 ntBASIC15.23■□□□□ 0.03
HOXC12P31275 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 AC107918.4-202ENST00000641623 219 ntBASIC15.23■□□□□ 0.03
HOXC12P31275 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXC12P31275 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXC12P31275 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXC12P31275 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HOXC12P31275 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
HOXC12P31275 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXC12P31275 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXC12P31275 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXC12P31275 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXC12P31275 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HOXC12P31275 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXC12P31275 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXC12P31275 AC004817.3-201ENST00000602957 2129 ntBASIC15.22■□□□□ 0.03
HOXC12P31275 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXC12P31275 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
HOXC12P31275 AC148477.5-201ENST00000625164 1645 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms