Protein–RNA interactions for Protein: P29508

SERPINB3, Serpin B3, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINB3P29508 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SERPINB3P29508 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SERPINB3P29508 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SERPINB3P29508 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SERPINB3P29508 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SERPINB3P29508 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SERPINB3P29508 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SERPINB3P29508 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SERPINB3P29508 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SERPINB3P29508 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SERPINB3P29508 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SERPINB3P29508 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SERPINB3P29508 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SERPINB3P29508 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 BX276092.7-203ENST00000637198 1536 ntBASIC17.11■□□□□ 0.33
SERPINB3P29508 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SERPINB3P29508 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.11■□□□□ 0.33
SERPINB3P29508 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.11■□□□□ 0.33
SERPINB3P29508 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.11■□□□□ 0.33
SERPINB3P29508 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 IGHGP-201ENST00000390555 1178 ntBASIC17.11■□□□□ 0.33
SERPINB3P29508 SLC25A1P3-201ENST00000395415 828 ntBASIC17.11■□□□□ 0.33
SERPINB3P29508 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 KRT18P38-201ENST00000449496 1282 ntBASIC17.11■□□□□ 0.33
SERPINB3P29508 AP003733.1-201ENST00000491725 852 ntBASIC17.11■□□□□ 0.33
SERPINB3P29508 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.11■□□□□ 0.33
SERPINB3P29508 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.11■□□□□ 0.33
SERPINB3P29508 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.11■□□□□ 0.33
SERPINB3P29508 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SERPINB3P29508 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.11■□□□□ 0.33
SERPINB3P29508 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.11■□□□□ 0.33
SERPINB3P29508 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 AL353692.3-201ENST00000407031 1396 ntBASIC17.11■□□□□ 0.33
SERPINB3P29508 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
SERPINB3P29508 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SERPINB3P29508 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.1■□□□□ 0.33
SERPINB3P29508 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.1■□□□□ 0.33
SERPINB3P29508 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 NFIC-211ENST00000641145 8399 ntBASIC17.1■□□□□ 0.33
SERPINB3P29508 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.1■□□□□ 0.33
SERPINB3P29508 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SERPINB3P29508 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.1■□□□□ 0.33
SERPINB3P29508 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.1■□□□□ 0.33
SERPINB3P29508 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SERPINB3P29508 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 AC068472.1-201ENST00000474589 881 ntBASIC17.1■□□□□ 0.33
SERPINB3P29508 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 ZNF444P1-201ENST00000559497 298 ntBASIC17.1■□□□□ 0.33
SERPINB3P29508 NTF6B-201ENST00000591913 560 ntBASIC17.1■□□□□ 0.33
SERPINB3P29508 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.1■□□□□ 0.33
SERPINB3P29508 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SERPINB3P29508 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SERPINB3P29508 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SERPINB3P29508 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SERPINB3P29508 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.1■□□□□ 0.33
SERPINB3P29508 AC093525.9-201ENST00000624961 1746 ntBASIC17.1■□□□□ 0.33
SERPINB3P29508 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SERPINB3P29508 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SERPINB3P29508 AL513523.2-202ENST00000427283 2040 ntBASIC17.09■□□□□ 0.33
SERPINB3P29508 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SERPINB3P29508 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SERPINB3P29508 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.09■□□□□ 0.33
SERPINB3P29508 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SERPINB3P29508 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms