Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
EPHA3P29320 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 FRMD8P1-201ENST00000440433 1524 ntBASIC16.71■□□□□ 0.27
EPHA3P29320 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
EPHA3P29320 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
EPHA3P29320 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.71■□□□□ 0.27
EPHA3P29320 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.71■□□□□ 0.27
EPHA3P29320 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
EPHA3P29320 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHA3P29320 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
EPHA3P29320 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 KRT18P38-201ENST00000449496 1282 ntBASIC16.71■□□□□ 0.27
EPHA3P29320 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
EPHA3P29320 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHA3P29320 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.71■□□□□ 0.27
EPHA3P29320 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA3P29320 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHA3P29320 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
EPHA3P29320 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
EPHA3P29320 KRT8P10-201ENST00000450021 1447 ntBASIC16.7■□□□□ 0.26
EPHA3P29320 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA3P29320 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
EPHA3P29320 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHA3P29320 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA3P29320 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 HLA-A-202ENST00000376806 1854 ntBASIC16.7■□□□□ 0.26
EPHA3P29320 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
EPHA3P29320 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA3P29320 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHA3P29320 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
EPHA3P29320 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHA3P29320 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA3P29320 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.7■□□□□ 0.26
EPHA3P29320 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA3P29320 AC087499.1-201ENST00000418141 1075 ntBASIC16.7■□□□□ 0.26
EPHA3P29320 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.7■□□□□ 0.26
EPHA3P29320 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.7■□□□□ 0.26
EPHA3P29320 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
EPHA3P29320 AC111152.3-201ENST00000569699 673 ntBASIC16.7■□□□□ 0.26
EPHA3P29320 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.7■□□□□ 0.26
EPHA3P29320 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.7■□□□□ 0.26
EPHA3P29320 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
EPHA3P29320 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA3P29320 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHA3P29320 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
EPHA3P29320 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA3P29320 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
EPHA3P29320 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EPHA3P29320 AL135999.2-201ENST00000622438 1686 ntBASIC16.69■□□□□ 0.26
EPHA3P29320 AC007950.2-201ENST00000615045 2347 ntBASIC16.69■□□□□ 0.26
EPHA3P29320 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
EPHA3P29320 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 AL513523.2-202ENST00000427283 2040 ntBASIC16.69■□□□□ 0.26
EPHA3P29320 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
EPHA3P29320 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EPHA3P29320 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
EPHA3P29320 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.69■□□□□ 0.26
EPHA3P29320 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EPHA3P29320 STK25P1-201ENST00000585406 838 ntBASIC16.69■□□□□ 0.26
EPHA3P29320 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
EPHA3P29320 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EPHA3P29320 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA3P29320 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EPHA3P29320 AC125634.1-201ENST00000438758 1403 ntBASIC16.69■□□□□ 0.26
EPHA3P29320 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms