Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.41□□□□□ -0.1
LMO1P25800 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LMO1P25800 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.41□□□□□ -0.1
LMO1P25800 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.41□□□□□ -0.1
LMO1P25800 KRT18P56-201ENST00000507275 550 ntBASIC14.41□□□□□ -0.1
LMO1P25800 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO1P25800 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.41□□□□□ -0.1
LMO1P25800 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.41□□□□□ -0.1
LMO1P25800 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO1P25800 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO1P25800 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO1P25800 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO1P25800 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LMO1P25800 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO1P25800 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.4□□□□□ -0.1
LMO1P25800 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LMO1P25800 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO1P25800 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.4□□□□□ -0.1
LMO1P25800 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LMO1P25800 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 RBM17P3-201ENST00000417687 1192 ntBASIC14.4□□□□□ -0.1
LMO1P25800 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LMO1P25800 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO1P25800 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.4□□□□□ -0.1
LMO1P25800 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.4□□□□□ -0.1
LMO1P25800 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO1P25800 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.4□□□□□ -0.1
LMO1P25800 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO1P25800 AC026691.1-201ENST00000602502 2017 ntBASIC14.4□□□□□ -0.1
LMO1P25800 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LMO1P25800 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LMO1P25800 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO1P25800 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
LMO1P25800 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO1P25800 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO1P25800 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 AC004817.3-201ENST00000602957 2129 ntBASIC14.39□□□□□ -0.11
LMO1P25800 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.39□□□□□ -0.11
LMO1P25800 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
LMO1P25800 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO1P25800 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LMO1P25800 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LMO1P25800 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LMO1P25800 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO1P25800 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.39□□□□□ -0.11
LMO1P25800 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.39□□□□□ -0.11
LMO1P25800 FOSL1P1-201ENST00000511041 816 ntBASIC14.39□□□□□ -0.11
LMO1P25800 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.39□□□□□ -0.11
LMO1P25800 MIR3652-201ENST00000579335 131 ntBASIC14.39□□□□□ -0.11
LMO1P25800 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.39□□□□□ -0.11
LMO1P25800 AC138894.3-201ENST00000603787 634 ntBASIC14.39□□□□□ -0.11
LMO1P25800 AP001269.4-201ENST00000609611 512 ntBASIC14.39□□□□□ -0.11
LMO1P25800 AL121772.3-201ENST00000610840 674 ntBASIC14.39□□□□□ -0.11
LMO1P25800 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.39□□□□□ -0.11
LMO1P25800 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 AC097637.2-201ENST00000624096 1997 ntBASIC14.39□□□□□ -0.11
LMO1P25800 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.39□□□□□ -0.11
LMO1P25800 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LMO1P25800 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LMO1P25800 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms