Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 ALOX12P2-203ENST00000570921 1945 ntBASIC13.33□□□□□ -0.28
RAB5AP20339 AL603832.2-201ENST00000566195 2125 ntBASIC13.33□□□□□ -0.28
RAB5AP20339 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB5AP20339 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RAB5AP20339 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB5AP20339 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB5AP20339 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB5AP20339 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB5AP20339 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB5AP20339 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
RAB5AP20339 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RAB5AP20339 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 CICP24-201ENST00000605464 2705 ntBASIC13.32□□□□□ -0.28
RAB5AP20339 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB5AP20339 AC137761.2-201ENST00000561729 223 ntBASIC13.32□□□□□ -0.28
RAB5AP20339 AC145350.3-201ENST00000569033 163 ntBASIC13.32□□□□□ -0.28
RAB5AP20339 NTF6G-201ENST00000591094 616 ntBASIC13.32□□□□□ -0.28
RAB5AP20339 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 BID-214ENST00000617586 542 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB5AP20339 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB5AP20339 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB5AP20339 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB5AP20339 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5AP20339 AL122018.1-201ENST00000446607 2310 ntBASIC13.31□□□□□ -0.28
RAB5AP20339 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAB5AP20339 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB5AP20339 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5AP20339 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RAB5AP20339 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 AC010491.1-201ENST00000563101 2797 ntBASIC13.31□□□□□ -0.28
RAB5AP20339 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5AP20339 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB5AP20339 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 CNN2P6-201ENST00000439038 900 ntBASIC13.31□□□□□ -0.28
RAB5AP20339 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB5AP20339 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB5AP20339 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 AL160286.2-201ENST00000567150 934 ntBASIC13.31□□□□□ -0.28
RAB5AP20339 AC005829.2-201ENST00000571422 1056 ntBASIC13.31□□□□□ -0.28
RAB5AP20339 KRT18P61-201ENST00000585825 1298 ntBASIC13.31□□□□□ -0.28
RAB5AP20339 AC005181.1-201ENST00000604782 1256 ntBASIC13.31□□□□□ -0.28
RAB5AP20339 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB5AP20339 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RAB5AP20339 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5AP20339 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5AP20339 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5AP20339 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms