Protein–RNA interactions for Protein: P09327

VIL1, Villin-1, humanhuman

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1P09327 EGFEM1P-202ENST00000431685 1563 ntBASIC20.28■□□□□ 0.84
VIL1P09327 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.28■□□□□ 0.84
VIL1P09327 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.28■□□□□ 0.84
VIL1P09327 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VIL1P09327 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VIL1P09327 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VIL1P09327 BICD1-207ENST00000551848 1962 ntBASIC20.28■□□□□ 0.84
VIL1P09327 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VIL1P09327 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.28■□□□□ 0.84
VIL1P09327 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VIL1P09327 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VIL1P09327 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VIL1P09327 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.27■□□□□ 0.84
VIL1P09327 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VIL1P09327 AC131009.4-201ENST00000624048 1740 ntBASIC20.27■□□□□ 0.84
VIL1P09327 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VIL1P09327 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.27■□□□□ 0.84
VIL1P09327 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.27■□□□□ 0.84
VIL1P09327 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 AC133963.1-201ENST00000504166 1679 ntBASIC20.27■□□□□ 0.84
VIL1P09327 AP3S2-216ENST00000617003 1561 ntBASIC20.27■□□□□ 0.84
VIL1P09327 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.27■□□□□ 0.84
VIL1P09327 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.27■□□□□ 0.84
VIL1P09327 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.27■□□□□ 0.84
VIL1P09327 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.27■□□□□ 0.84
VIL1P09327 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.27■□□□□ 0.84
VIL1P09327 AC073389.1-201ENST00000595595 795 ntBASIC20.27■□□□□ 0.84
VIL1P09327 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VIL1P09327 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.27■□□□□ 0.84
VIL1P09327 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VIL1P09327 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VIL1P09327 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VIL1P09327 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
VIL1P09327 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VIL1P09327 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.26■□□□□ 0.83
VIL1P09327 AC022144.1-201ENST00000602255 1580 ntBASIC20.26■□□□□ 0.83
VIL1P09327 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.26■□□□□ 0.83
VIL1P09327 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
VIL1P09327 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.26■□□□□ 0.83
VIL1P09327 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VIL1P09327 AC007967.4-201ENST00000614700 386 ntBASIC20.26■□□□□ 0.83
VIL1P09327 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 AC012317.2-201ENST00000623305 2251 ntBASIC20.26■□□□□ 0.83
VIL1P09327 AL355312.1-201ENST00000407115 2176 ntBASIC20.26■□□□□ 0.83
VIL1P09327 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.26■□□□□ 0.83
VIL1P09327 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VIL1P09327 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.26■□□□□ 0.83
VIL1P09327 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VIL1P09327 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.26■□□□□ 0.83
VIL1P09327 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 COX5BP8-201ENST00000416911 349 ntBASIC20.25■□□□□ 0.83
VIL1P09327 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.25■□□□□ 0.83
VIL1P09327 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.25■□□□□ 0.83
VIL1P09327 SPTLC1P1-201ENST00000447199 261 ntBASIC20.25■□□□□ 0.83
VIL1P09327 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.25■□□□□ 0.83
VIL1P09327 AC105233.2-201ENST00000523697 349 ntBASIC20.25■□□□□ 0.83
VIL1P09327 AF228730.5-201ENST00000530288 346 ntBASIC20.25■□□□□ 0.83
VIL1P09327 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.25■□□□□ 0.83
VIL1P09327 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 AL138828.2-201ENST00000615812 383 ntBASIC20.25■□□□□ 0.83
VIL1P09327 SPDYE12P-201ENST00000618416 771 ntBASIC20.25■□□□□ 0.83
VIL1P09327 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.25■□□□□ 0.83
VIL1P09327 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VIL1P09327 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VIL1P09327 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VIL1P09327 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms