Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.13
CTSDP07339 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.27□□□□□ -0.13
CTSDP07339 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CTSDP07339 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.27□□□□□ -0.13
CTSDP07339 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTSDP07339 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.27□□□□□ -0.13
CTSDP07339 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 CYP2D8P-201ENST00000433633 1490 ntBASIC14.26□□□□□ -0.13
CTSDP07339 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 MMP23A-201ENST00000234610 1017 ntBASIC14.26□□□□□ -0.13
CTSDP07339 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
CTSDP07339 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 HLA-F-220ENST00000434407 884 ntBASIC14.26□□□□□ -0.13
CTSDP07339 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.26□□□□□ -0.13
CTSDP07339 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.26□□□□□ -0.13
CTSDP07339 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 AC010947.1-201ENST00000623454 693 ntBASIC14.26□□□□□ -0.13
CTSDP07339 AC105917.1-201ENST00000506637 2539 ntBASIC14.26□□□□□ -0.13
CTSDP07339 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CTSDP07339 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 AC092364.2-201ENST00000596710 2692 ntBASIC14.26□□□□□ -0.13
CTSDP07339 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CTSDP07339 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CTSDP07339 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.25□□□□□ -0.13
CTSDP07339 GPR89P-201ENST00000407924 1495 ntBASIC14.25□□□□□ -0.13
CTSDP07339 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 AL391256.1-201ENST00000443260 1855 ntBASIC14.25□□□□□ -0.13
CTSDP07339 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.25□□□□□ -0.13
CTSDP07339 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CTSDP07339 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.25□□□□□ -0.13
CTSDP07339 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.25□□□□□ -0.13
CTSDP07339 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 AC111152.3-201ENST00000569699 673 ntBASIC14.25□□□□□ -0.13
CTSDP07339 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CTSDP07339 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.25□□□□□ -0.13
CTSDP07339 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms