Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SSSCA1O60232 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSSCA1O60232 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SSSCA1O60232 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.03□□□□□ -0.16
SSSCA1O60232 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SSSCA1O60232 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 AC103702.1-201ENST00000548801 2630 ntBASIC14.03□□□□□ -0.16
SSSCA1O60232 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SSSCA1O60232 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SSSCA1O60232 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 TSPY12P-201ENST00000421279 868 ntBASIC14.03□□□□□ -0.16
SSSCA1O60232 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.03□□□□□ -0.16
SSSCA1O60232 RBM17P1-201ENST00000453646 1190 ntBASIC14.03□□□□□ -0.16
SSSCA1O60232 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SSSCA1O60232 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.03□□□□□ -0.16
SSSCA1O60232 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.03□□□□□ -0.16
SSSCA1O60232 AP003071.4-201ENST00000562276 1284 ntBASIC14.03□□□□□ -0.16
SSSCA1O60232 C2orf69P3-201ENST00000565542 1120 ntBASIC14.03□□□□□ -0.16
SSSCA1O60232 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SSSCA1O60232 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.03□□□□□ -0.16
SSSCA1O60232 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.03□□□□□ -0.16
SSSCA1O60232 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.03□□□□□ -0.16
SSSCA1O60232 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.03□□□□□ -0.16
SSSCA1O60232 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.03□□□□□ -0.16
SSSCA1O60232 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.03□□□□□ -0.16
SSSCA1O60232 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSSCA1O60232 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSSCA1O60232 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.02□□□□□ -0.16
SSSCA1O60232 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSSCA1O60232 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.02□□□□□ -0.16
SSSCA1O60232 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.02□□□□□ -0.16
SSSCA1O60232 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SSSCA1O60232 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.02□□□□□ -0.16
SSSCA1O60232 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSSCA1O60232 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.02□□□□□ -0.16
SSSCA1O60232 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.16
SSSCA1O60232 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSSCA1O60232 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSSCA1O60232 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.02□□□□□ -0.16
SSSCA1O60232 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSSCA1O60232 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSSCA1O60232 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 AC012618.2-201ENST00000428058 849 ntBASIC14.02□□□□□ -0.17
SSSCA1O60232 AL390955.1-201ENST00000428694 934 ntBASIC14.02□□□□□ -0.17
SSSCA1O60232 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.02□□□□□ -0.17
SSSCA1O60232 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.02□□□□□ -0.17
SSSCA1O60232 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.02□□□□□ -0.17
SSSCA1O60232 MIR4651-201ENST00000582622 73 ntBASIC14.02□□□□□ -0.17
SSSCA1O60232 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SSSCA1O60232 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.02□□□□□ -0.17
SSSCA1O60232 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.02□□□□□ -0.17
SSSCA1O60232 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.02□□□□□ -0.17
SSSCA1O60232 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSSCA1O60232 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.01□□□□□ -0.17
SSSCA1O60232 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SSSCA1O60232 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 AC105917.1-201ENST00000506637 2539 ntBASIC14.01□□□□□ -0.17
SSSCA1O60232 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 KRT89P-201ENST00000620027 1478 ntBASIC14.01□□□□□ -0.17
SSSCA1O60232 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms