Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
RNF13O43567 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF13O43567 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RNF13O43567 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF13O43567 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF13O43567 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF13O43567 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF13O43567 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF13O43567 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF13O43567 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF13O43567 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF13O43567 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.64■□□□□ 0.09
RNF13O43567 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RNF13O43567 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF13O43567 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 MIR1224-201ENST00000408193 85 ntBASIC15.64■□□□□ 0.09
RNF13O43567 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF13O43567 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF13O43567 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.64■□□□□ 0.09
RNF13O43567 AC104819.1-201ENST00000504587 486 ntBASIC15.64■□□□□ 0.09
RNF13O43567 STK19B-204ENST00000512515 211 ntBASIC15.64■□□□□ 0.09
RNF13O43567 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF13O43567 STK25P1-201ENST00000585406 838 ntBASIC15.64■□□□□ 0.09
RNF13O43567 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF13O43567 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF13O43567 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF13O43567 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF13O43567 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF13O43567 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RNF13O43567 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 AC116353.5-201ENST00000638148 1699 ntBASIC15.63■□□□□ 0.09
RNF13O43567 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF13O43567 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
RNF13O43567 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF13O43567 AC005915.1-201ENST00000624912 2018 ntBASIC15.63■□□□□ 0.09
RNF13O43567 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF13O43567 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RNF13O43567 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RNF13O43567 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF13O43567 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF13O43567 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF13O43567 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF13O43567 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.63■□□□□ 0.09
RNF13O43567 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.63■□□□□ 0.09
RNF13O43567 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF13O43567 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms