Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 AC138894.3-201ENST00000603787 634 ntBASIC13.82□□□□□ -0.2
SRRM4A7MD48 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.82□□□□□ -0.2
SRRM4A7MD48 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRRM4A7MD48 AC097637.2-201ENST00000624096 1997 ntBASIC13.82□□□□□ -0.2
SRRM4A7MD48 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 SIGLEC16-201ENST00000599858 1437 ntBASIC13.81□□□□□ -0.2
SRRM4A7MD48 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 KRT16P4-201ENST00000453883 522 ntBASIC13.81□□□□□ -0.2
SRRM4A7MD48 AC132008.2-207ENST00000454517 770 ntBASIC13.81□□□□□ -0.2
SRRM4A7MD48 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 AC073592.4-201ENST00000623827 446 ntBASIC13.81□□□□□ -0.2
SRRM4A7MD48 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 AP005117.1-201ENST00000584346 1413 ntBASIC13.81□□□□□ -0.2
SRRM4A7MD48 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRRM4A7MD48 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SRRM4A7MD48 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 AC079776.2-201ENST00000641154 1609 ntBASIC13.8□□□□□ -0.2
SRRM4A7MD48 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 ACTG1P4-201ENST00000425123 1122 ntBASIC13.8□□□□□ -0.2
SRRM4A7MD48 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 FOSL1P1-201ENST00000511041 816 ntBASIC13.8□□□□□ -0.2
SRRM4A7MD48 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.8□□□□□ -0.2
SRRM4A7MD48 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.8□□□□□ -0.2
SRRM4A7MD48 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRRM4A7MD48 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms