Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 MTCL1P1-201ENST00000446207 792 ntBASIC12.09□□□□□ -0.47
LINC01546A6NGU7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.09□□□□□ -0.47
LINC01546A6NGU7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 AC004263.2-201ENST00000617183 678 ntBASIC12.09□□□□□ -0.47
LINC01546A6NGU7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.09□□□□□ -0.47
LINC01546A6NGU7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LINC01546A6NGU7 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.08□□□□□ -0.47
LINC01546A6NGU7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
LINC01546A6NGU7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 AL135999.2-201ENST00000622438 1686 ntBASIC12.08□□□□□ -0.48
LINC01546A6NGU7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 AC007663.1-201ENST00000438948 1240 ntBASIC12.08□□□□□ -0.48
LINC01546A6NGU7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 AC010653.2-201ENST00000623505 997 ntBASIC12.08□□□□□ -0.48
LINC01546A6NGU7 AL157888.1-201ENST00000631930 593 ntBASIC12.08□□□□□ -0.48
LINC01546A6NGU7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01546A6NGU7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms