Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 IGHV3-52-201ENST00000519770 353 ntBASIC14.69□□□□□ -0.06
TMEM235A6NFC5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.69□□□□□ -0.06
TMEM235A6NFC5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM235A6NFC5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 PAUPAR-201ENST00000630360 2965 ntBASIC14.68□□□□□ -0.06
TMEM235A6NFC5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 IGHGP-201ENST00000390555 1178 ntBASIC14.68□□□□□ -0.06
TMEM235A6NFC5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 AC109462.3-201ENST00000573934 613 ntBASIC14.68□□□□□ -0.06
TMEM235A6NFC5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 AL023973.1-201ENST00000624619 620 ntBASIC14.68□□□□□ -0.06
TMEM235A6NFC5 AL353692.3-201ENST00000407031 1396 ntBASIC14.68□□□□□ -0.06
TMEM235A6NFC5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 LINC00554-201ENST00000564841 3011 ntBASIC14.68□□□□□ -0.06
TMEM235A6NFC5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM235A6NFC5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 MST1L-201ENST00000442552 2185 ntBASIC14.67□□□□□ -0.06
TMEM235A6NFC5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM235A6NFC5 HLA-F-220ENST00000434407 884 ntBASIC14.67□□□□□ -0.06
TMEM235A6NFC5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms