Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 MIR4497-201ENST00000583208 89 ntBASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D4Q9Y2X8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 MIR662-201ENST00000384847 95 ntBASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 STARP1-201ENST00000397973 869 ntBASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 AC007967.3-201ENST00000434308 558 ntBASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 AP002490.2-201ENST00000524791 560 ntBASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 AC111152.3-201ENST00000569699 673 ntBASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 AP006294.2-201ENST00000641667 209 ntBASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 AC022188.1-201ENST00000620960 1664 ntBASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.97□□□□□ -0.49
UBE2D4Q9Y2X8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms