Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 AC005332.8-201ENST00000622750 2735 ntBASIC23.29■■□□□ 1.32
NINLQ9Y2I6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 RNU1-129P-201ENST00000384064 167 ntBASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AC004461.1-201ENST00000412461 403 ntBASIC23.28■■□□□ 1.32
NINLQ9Y2I6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AC087641.1-201ENST00000557561 1021 ntBASIC23.28■■□□□ 1.32
NINLQ9Y2I6 RARRES2P8-201ENST00000566335 367 ntBASIC23.28■■□□□ 1.32
NINLQ9Y2I6 U1.21-201ENST00000580816 167 ntBASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AKAP8P1-201ENST00000434743 1349 ntBASIC23.28■■□□□ 1.32
NINLQ9Y2I6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
NINLQ9Y2I6 AL021920.2-201ENST00000624828 1351 ntBASIC23.28■■□□□ 1.32
NINLQ9Y2I6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 AL161645.1-201ENST00000622716 1255 ntBASIC23.27■■□□□ 1.32
NINLQ9Y2I6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC23.27■■□□□ 1.32
NINLQ9Y2I6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
NINLQ9Y2I6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
NINLQ9Y2I6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
NINLQ9Y2I6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC23.27■■□□□ 1.31
NINLQ9Y2I6 AC005034.1-201ENST00000426657 489 ntBASIC23.27■■□□□ 1.31
NINLQ9Y2I6 AC023141.5-201ENST00000458585 616 ntBASIC23.27■■□□□ 1.31
NINLQ9Y2I6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
NINLQ9Y2I6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC23.27■■□□□ 1.31
NINLQ9Y2I6 MPDU1-223ENST00000582151 728 ntBASIC23.27■■□□□ 1.31
NINLQ9Y2I6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
NINLQ9Y2I6 AC026120.1-201ENST00000611536 926 ntBASIC23.27■■□□□ 1.31
NINLQ9Y2I6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC23.27■■□□□ 1.31
NINLQ9Y2I6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 LINC00896-202ENST00000609602 2128 ntBASIC23.26■■□□□ 1.31
NINLQ9Y2I6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NINLQ9Y2I6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms