Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SHANK2Q9UPX8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 MIR943-201ENST00000401286 94 ntBASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 INGX-202ENST00000489074 768 ntBASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 AC013467.2-201ENST00000605472 835 ntBASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
SHANK2Q9UPX8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 UGT1A2P-201ENST00000454886 866 ntBASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 AL390754.1-201ENST00000619088 582 ntBASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 RHBDF1P1-201ENST00000427504 1941 ntBASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
SHANK2Q9UPX8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 AC069120.2-201ENST00000524091 540 ntBASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC25.16■■□□□ 1.62
SHANK2Q9UPX8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 FAM207CP-201ENST00000443486 507 ntBASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 TUBB8P12-201ENST00000308911 1335 ntBASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 TUBB7P-202ENST00000428444 1305 ntBASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 TUBB8P7-204ENST00000567960 1332 ntBASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 AC007967.4-201ENST00000614700 386 ntBASIC25.15■■□□□ 1.62
SHANK2Q9UPX8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SHANK2Q9UPX8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SHANK2Q9UPX8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SHANK2Q9UPX8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC25.14■■□□□ 1.62
SHANK2Q9UPX8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SHANK2Q9UPX8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SHANK2Q9UPX8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SHANK2Q9UPX8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms