Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC3Q9UN70 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 TPM4P1-201ENST00000436100 807 ntBASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 RPS15P9-201ENST00000494093 319 ntBASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 AL773604.1-201ENST00000617417 272 ntBASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 PCDHB17P-201ENST00000539533 2393 ntBASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC3Q9UN70 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 NKILA-202ENST00000614771 2598 ntBASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 AC087163.2-201ENST00000457299 853 ntBASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 AL356488.2-201ENST00000602755 427 ntBASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 PGM5P2-202ENST00000637225 1043 ntBASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 PI4KAP1-204ENST00000612579 1703 ntBASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 KRT8P49-201ENST00000604166 1432 ntBASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC3Q9UN70 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 AL031284.1-201ENST00000419297 478 ntBASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 RNA5SP419-201ENST00000515908 135 ntBASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 AP002490.2-201ENST00000524791 560 ntBASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 AC008667.4-201ENST00000607370 168 ntBASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 GGTLC5P-201ENST00000617623 998 ntBASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGC3Q9UN70 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms