Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 AL353593.2-201ENST00000602529 1483 ntBASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOMER3Q9NSC5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 AL645929.1-201ENST00000420084 975 ntBASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 SPDYE13P-201ENST00000445314 798 ntBASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 AL592071.1-201ENST00000611956 408 ntBASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 AC092068.3-201ENST00000587894 2016 ntBASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOMER3Q9NSC5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 AC246785.2-201ENST00000432512 513 ntBASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 AP002490.2-201ENST00000524791 560 ntBASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 AC009533.2-201ENST00000543664 586 ntBASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 LINC01238-205ENST00000567549 1107 ntBASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 AC083849.1-201ENST00000615227 514 ntBASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HOMER3Q9NSC5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms