Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CHML-204ENST00000638121 920 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CICP11-201ENST00000434745 2827 ntBASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CDC42SE1Q9NRR8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC8.71□□□□□ -1.01
CDC42SE1Q9NRR8 CICP16-201ENST00000502609 2813 ntBASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 CIC-204ENST00000572681 8218 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 RARRES2P7-201ENST00000567349 469 ntBASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 AP001972.5-201ENST00000624624 2338 ntBASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms