Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 CYP2T1P-202ENST00000641596 2535 ntBASIC21.12■□□□□ 0.97
UPF2Q9HAU5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.11■□□□□ 0.97
UPF2Q9HAU5 AP003733.1-201ENST00000491725 852 ntBASIC21.11■□□□□ 0.97
UPF2Q9HAU5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
UPF2Q9HAU5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 HLA-F-220ENST00000434407 884 ntBASIC21.1■□□□□ 0.97
UPF2Q9HAU5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
UPF2Q9HAU5 AC010460.3-201ENST00000511359 1579 ntBASIC21.1■□□□□ 0.97
UPF2Q9HAU5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 ZNF444P1-201ENST00000559497 298 ntBASIC21.09■□□□□ 0.97
UPF2Q9HAU5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 AL391005.1-201ENST00000623953 2435 ntBASIC21.09■□□□□ 0.97
UPF2Q9HAU5 EGFEM1P-202ENST00000431685 1563 ntBASIC21.09■□□□□ 0.97
UPF2Q9HAU5 PCDHA1-201ENST00000378133 2726 ntBASIC21.09■□□□□ 0.97
UPF2Q9HAU5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UPF2Q9HAU5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms