Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
ATP13A3Q9H7F0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP13A3Q9H7F0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP13A3Q9H7F0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP13A3Q9H7F0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP13A3Q9H7F0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP13A3Q9H7F0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 ZNF259P1-201ENST00000407656 1365 ntBASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 AC108751.1-201ENST00000490852 363 ntBASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 IGHV3-65-201ENST00000523210 341 ntBASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 AC145285.3-201ENST00000564603 959 ntBASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 AC104109.2-201ENST00000602919 1418 ntBASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 Z83851.2-201ENST00000609564 659 ntBASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP13A3Q9H7F0 AC141586.5-201ENST00000624546 2050 ntBASIC17.33■□□□□ 0.37
ATP13A3Q9H7F0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP13A3Q9H7F0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
ATP13A3Q9H7F0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.33■□□□□ 0.37
ATP13A3Q9H7F0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP13A3Q9H7F0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 SLC25A1P1-201ENST00000528351 927 ntBASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 TERC-201ENST00000602385 541 ntBASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 AF228730.7-201ENST00000641842 219 ntBASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP13A3Q9H7F0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 AC124067.4-201ENST00000519691 2379 ntBASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 AC009947.1-201ENST00000444350 727 ntBASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 AC108073.2-201ENST00000464002 357 ntBASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP13A3Q9H7F0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP13A3Q9H7F0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms