Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 AC096633.1-201ENST00000422446 749 ntBASIC19.19■□□□□ 0.66
TRIM5Q9C035 AL158047.1-201ENST00000445918 881 ntBASIC19.19■□□□□ 0.66
TRIM5Q9C035 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.18■□□□□ 0.66
TRIM5Q9C035 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM5Q9C035 PKD1P5-201ENST00000532415 10291 ntBASIC19.18■□□□□ 0.66
TRIM5Q9C035 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM5Q9C035 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 MYCLP1-201ENST00000372451 1075 ntBASIC19.17■□□□□ 0.66
TRIM5Q9C035 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 AC068418.2-201ENST00000577309 3703 ntBASIC19.17■□□□□ 0.66
TRIM5Q9C035 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRIM5Q9C035 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM5Q9C035 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TRIM5Q9C035 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM5Q9C035 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM5Q9C035 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM5Q9C035 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM5Q9C035 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM5Q9C035 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM5Q9C035 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM5Q9C035 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM5Q9C035 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TRIM5Q9C035 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM5Q9C035 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM5Q9C035 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM5Q9C035 EGFEM1P-202ENST00000431685 1563 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms