Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.43□□□□□ -0.58
LITAFQ99732 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.43□□□□□ -0.58
LITAFQ99732 AL023803.3-201ENST00000615559 522 ntBASIC11.43□□□□□ -0.58
LITAFQ99732 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LITAFQ99732 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LITAFQ99732 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.42□□□□□ -0.58
LITAFQ99732 AC097488.1-201ENST00000507834 756 ntBASIC11.42□□□□□ -0.58
LITAFQ99732 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LITAFQ99732 GAMT-205ENST00000640762 751 ntTSL 5 BASIC11.42□□□□□ -0.58
LITAFQ99732 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LITAFQ99732 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LITAFQ99732 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LITAFQ99732 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.42□□□□□ -0.58
LITAFQ99732 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LITAFQ99732 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 PPT1-215ENST00000641471 2368 ntBASIC11.41□□□□□ -0.58
LITAFQ99732 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
LITAFQ99732 MYCLP1-201ENST00000372451 1075 ntBASIC11.41□□□□□ -0.58
LITAFQ99732 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC11.41□□□□□ -0.58
LITAFQ99732 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 AC026271.2-201ENST00000428091 497 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms