Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 CR769767.2-201ENST00000622735 460 ntBASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 AL136379.1-201ENST00000623471 2642 ntBASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP6Q96FZ7 DBET-201ENST00000630918 3363 ntBASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 MIR4497-201ENST00000583208 89 ntBASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP6Q96FZ7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 SLC25A1P2-201ENST00000430693 912 ntBASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 TSPY17P-201ENST00000450329 467 ntBASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 AP003041.3-201ENST00000527151 707 ntBASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 FITM1-202ENST00000559294 800 ntBASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.31■□□□□ 0.36
CHMP6Q96FZ7 AC116562.4-202ENST00000641738 218 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms