Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 AL603832.2-201ENST00000566195 2125 ntBASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.51□□□□□ -0.41
CHCHD1Q96BP2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 AC013268.4-201ENST00000637413 2228 ntBASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHCHD1Q96BP2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHCHD1Q96BP2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHCHD1Q96BP2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CHCHD1Q96BP2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.49□□□□□ -0.41
CHCHD1Q96BP2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHCHD1Q96BP2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.49□□□□□ -0.41
CHCHD1Q96BP2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHCHD1Q96BP2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHCHD1Q96BP2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms