Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLCO4A1Q96BD0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLCO4A1Q96BD0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLCO4A1Q96BD0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLCO4A1Q96BD0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 AL391807.1-203ENST00000604392 2365 ntBASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SLCO4A1Q96BD0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 EGLN1P1-201ENST00000531623 762 ntBASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLCO4A1Q96BD0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 NAPSB-206ENST00000562112 1266 ntBASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 CYP2D8P-201ENST00000433633 1490 ntBASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLCO4A1Q96BD0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 AC006538.1-201ENST00000567905 1585 ntBASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms