Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 AC007064.4-201ENST00000637740 555 ntBASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 AC116353.5-201ENST00000638148 1699 ntBASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 LINC00896-202ENST00000609602 2128 ntBASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP6V0A1Q93050 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 AC023141.13-201ENST00000604991 943 ntBASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATP6V0A1Q93050 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.14■□□□□ 0.66
ATP6V0A1Q93050 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP6V0A1Q93050 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP6V0A1Q93050 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
ATP6V0A1Q93050 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP6V0A1Q93050 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 AC087163.2-201ENST00000457299 853 ntBASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 AC074386.1-202ENST00000463561 864 ntBASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 AL031432.2-201ENST00000566714 459 ntBASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 AL928711.1-201ENST00000570165 459 ntBASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP6V0A1Q93050 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 SLC25A1P3-201ENST00000395415 828 ntBASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 CXCL1P1-201ENST00000502804 216 ntBASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms