Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC004817.3-201ENST00000602957 2129 ntBASIC17.42■□□□□ 0.38
PTCD2Q8WV60 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 AL691447.1-201ENST00000419456 387 ntBASIC17.41■□□□□ 0.38
PTCD2Q8WV60 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 KRT18P67-201ENST00000432816 1264 ntBASIC17.41■□□□□ 0.38
PTCD2Q8WV60 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 AC021087.4-201ENST00000563761 564 ntBASIC17.41■□□□□ 0.38
PTCD2Q8WV60 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCD2Q8WV60 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 NKAPP1-205ENST00000585790 367 ntBASIC17.4■□□□□ 0.38
PTCD2Q8WV60 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 AC124067.4-201ENST00000519691 2379 ntBASIC17.4■□□□□ 0.38
PTCD2Q8WV60 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCD2Q8WV60 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
PTCD2Q8WV60 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTCD2Q8WV60 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
PTCD2Q8WV60 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCD2Q8WV60 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms