Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 CD7-202ENST00000578509 925 ntTSL 3 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 AL009183.1-201ENST00000603760 355 ntBASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP43Q8NDM7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 TMPRSS11CP-201ENST00000453277 683 ntBASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 ALG1L8P-201ENST00000533887 760 ntBASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 FRMD8P1-201ENST00000440433 1524 ntBASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP43Q8NDM7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP43Q8NDM7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 AC022144.1-201ENST00000602255 1580 ntBASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 UXT-AS1-201ENST00000590504 1525 ntBASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP43Q8NDM7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 GPR53P-205ENST00000457298 1084 ntBASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 AC091167.2-201ENST00000579581 588 ntBASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 AL031055.1-201ENST00000606362 631 ntBASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 IGHV3-72-202ENST00000621503 303 ntBASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 AC068880.1-201ENST00000507289 2297 ntBASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC26.46■■□□□ 1.83
CFAP43Q8NDM7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
CFAP43Q8NDM7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
CFAP43Q8NDM7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.83
CFAP43Q8NDM7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
CFAP43Q8NDM7 RNU1-129P-201ENST00000384064 167 ntBASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms