Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ANKRD42Q8N9B4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 AC105917.1-201ENST00000506637 2539 ntBASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 INGX-201ENST00000359239 846 ntBASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 C2orf69P3-201ENST00000565542 1120 ntBASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 AC004263.2-201ENST00000617183 678 ntBASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 AC009154.2-201ENST00000621177 724 ntBASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ANKRD42Q8N9B4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 TSPY12P-201ENST00000421279 868 ntBASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 AC012618.2-201ENST00000428058 849 ntBASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 AC124947.2-201ENST00000547118 1133 ntBASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 AC233702.5-201ENST00000584107 538 ntBASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ANKRD42Q8N9B4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms